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cillusplantarumEubacteria*0:0.144)0.00422//0.00001//0.00368//0.00002[N128]:0.0676)0.00377//0.00019//0.01692//0.00014[N117]:0.0899)0.00329//0.01284//0.18768//0.00171[N104]:0.089)0.00163//0.39957//0.77719//0.00845[N97]:0.0954)0.0014//0.12887//0.0142//0.02142[N93]:0.0432)0.70007//0.66641//0.28227//0.78702[N13]:2.24,(((ThalassiosirapseudonanaCCMP1335PlantsEukarya*0:0.335,(CryptosporidiumhominisInvertebratesEukarya*0:0.25,Plasmodiumfalciparum3D7InvertebratesEukarya*0:0.283)0.01375//0.00043//0.01404//0.00049[N132]:0.144)0.00234//0.00005//0.00489//0.00006[N131]:0.0349,(((OryzasativaPlantsEukarya*0:0.0762,ArabidopsisthalianaPlantsEukarya*0:0.0937)0.0124//0.00036//0.01693//0.00028[N135]:0.158,CyanidioschyzonmerolaePlantsEukarya*0:0.383)0.00579//0.00019//0.01068//0.00024[N134]:0.0813,(DictyosteliumdiscoideumInvertebratesEukarya*1:0.347,(((EremotheciumgossypiiPlantsEukarya*0:0.073,SaccharomycescerevisiaePlantsEukarya*0:0.0762)0.01824//0.00107//0.02278//0.00096[N139]:0.212,SchizosaccharomycespombePlantsEukarya*0:0.247)0.01518//0.00062//0.02022//0.00067[N138]:0.154,(((Anophelesgambiaestr.PESTInvertebratesEukarya*0:0.107,DrosophilamelanogasterInvertebratesEukarya*0:0.102)0.00496//0.00003//0.00481//0.00003[N142]:0.0987,((TakifugurubripesVertebratesEukarya*0:0.0314,DaniorerioVertebratesEukarya*0:0.0523)0.00118//0//0.00122//0[N144]:0.0433,(((RattusnorvegicusRodentsEukarya*0:0.0311,MusmusculusRodentsEukarya*0:0.0165)0//0//0//0[N147]:0.00398,(HomosapiensPrimatesEukarya*0:0.00957,PantroglodytesPrimatesEukarya*0:0.0386)0.00031//0//0.0003//0[N148]:0.0155)0.0003//0//0.00036//0[N146]:0.0163,GallusgallusVertebratesEukarya*0:0.046)0.00044//0//0.00061//0[N145]:0.0186)0.00351//0.00001//0.00474//0.00001[N143]:0.0969)0.0014//0.00001//0.00255//0[N141]:0.0369,(CaenorhabditiselegansInvertebratesEukarya*0:0.0184,CaenorhabditisbriggsaeInvertebratesEukarya*0:0.019)0.02222//0.00122//0.02468//0.00121[N149]:0.243)0.00493//0.0002//0.01349//0.00015[N140]:0.0991)0.00189//0.00028//0.01835//0.00013[N137]:0.04)0.01771//0.00003//0.00123//0.00021[N136]:0.0271)0.0045//0.00005//0.00217//0.00003[N133]:0.0264)0.00371//0.00252//0.0212//0.00018[N130]:0.0645,LeishmaniamajorInvertebratesEukarya*0:0.457)0.07018//0.36847//0.47983//0.08193[N129]:0.677,((NanoarchaeumequitansArchaeabacteria*1:0.811,(((SulfolobustokodaiiArchaeabacteria*1:0.174,SulfolobussolfataricusArchaeabacteria*1:0.19)0.00556//0.18883//0.00425//0.21891[N153]:0.337,AeropyrumpernixArchaeabacteria*1:0.434)0.00396//0.05097//0.0007//0.08465[N152]:0.0946,PyrobaculumaerophilumArchaeabacteria*1:0.555)0.0373//0.0554//0.00138//0.18824[N151]:0.12)0.26924//0.05468//0.0036//0.3731[N150]:0.154,((((Methanothermobacterthermautotrophicusstr.DeltaHArchaeabacteria*0:0.366,MethanopyruskandleriArchaeabacteria*0:0.353)0.00566//0.01138//0.1022//0.00365[N7]:0.0745,(MethanococcusmaripaludisArchaeabacteria*0:0.286,MethanocaldococcusjannaschiiArchaeabacteria*0:0.132)0.02319//0.0249//0.17312//0.01116[N8]:0.238)0.00256//0.0782//0.2967//0.00405[N6]:0.0628,((PyrococcushorikoshiiArchaeabacteria*1:0.0279,PyrococcusabyssiArchaeabacteria*1:0.0218)0//0.00175//0//0.00821[N10]:0.0224,PyrococcusfuriosusArchaeabacteria*1:0.0237)0.54921//0.07695//0.01486//0.92084[N9]:0.362)0.01846//0.03798//0.02568//0.01212[N5]:0.0447,(ArchaeoglobusfulgidusArchaeabacteria*0:0.347,(Halobacteriumsp.NRC-1Archaeabacteria*1:0.616,(MethanosarcinaacetivoransArchaeabacteria*0:0.026,MethanosarcinamazeiArchaeabacteria*0:0.0309)0.0251//0.12954//0.33098//0.02079[N1]:0.306)0.05497//0.03621//0.04974//0.06208[N2]:0.128)0.01215//0.06015//0.17437//0.03218[N3]:0.104)0.01922//0.36104//0.2433//0.04747[N4]:0.186)0.28733//0.19399//0.0496//0.29019[N11]:0.433) ================= Bootstrap values in the tree represent posterior probabilities of: gainX//gainA//lossX//lossA[nodeName] ================= Parameters are: Mu1 (gain 1)= 0.376 Mu2 (gain 0)= 1.24 Mu3 (loss 1)= 3.28 Mu4 (loss 0)= 4.92 Freq (0)= 0.637 Freq (1)= 0.289 Freq (2)= 0.0731 Likelihood of data given parameters is -59.1 Expectation 0 to 1 =0 Expectation 1 to 0 =0 Expectation 0 to 2 =7.3 Expectation 1 to 2 =17.9 Expectation 2 to 0 =13 Expectation 2 to 1 =19.4 Gain X in branch N13 probability 0.7 Gain A in branch N13 probability 0.666 Gain A in branch BdellovibriobacteriovorusEubacteria*0 probability 0.742 Gain A in branch Fusobacteriumnucleatumsubsp.nucleatumEubacteria*0 probability 0.711 Gain A in branch DeinococcusradioduransEubacteria*0 probability 0.669 Gain A in branch Dehalococcoidesethenogenes195Eubacteria*2 probability 0.943 Gain A in branch BifidobacteriumlongumEubacteria*0 probability 0.625 Gain A in branch N80 probability 0.443 Gain A in branch N92 probability 0.672 Gain A in branch ClostridiumacetobutylicumEubacteria*2 probability 0.807 Gain X in branch N112 probability 0.964 Gain X in branch DictyosteliumdiscoideumInvertebratesEukarya*1 probability 0.973 Gain X in branch N9 probability 0.549 Gain X in branch Halobacteriumsp.NRC-1Archaeabacteria*1 probability 0.703 Loss A in branch N13 probability 0.787 Loss X in branch N19 probability 0.697 Loss X in branch N47 probability 0.589 Loss A in branch N54 probability 0.841 Loss A in branch N55 probability 0.599 Loss A in branch Desulfovibriovulgarissubsp.vulgarisstr.HildenboroughEubacteria*1 probability 0.423 Loss X in branch BdellovibriobacteriovorusEubacteria*0 probability 0.992 Loss X in branch Fusobacteriumnucleatumsubsp.nucleatumEubacteria*0 probability 0.997 Loss A in branch ThermusthermophilusHB27Eubacteria*1 probability 0.431 Loss X in branch DeinococcusradioduransEubacteria*0 probability 0.949 Loss A in branch N78 probability 0.54 Loss X in branch BifidobacteriumlongumEubacteria*0 probability 0.94 Loss X in branch N92 probability 0.964 Loss A in branch N94 probability 0.427 Loss X in branch N97 probability 0.777 Loss X in branch N129 probability 0.48 Loss A in branch DictyosteliumdiscoideumInvertebratesEukarya*1 probability 1 Loss A in branch NanoarchaeumequitansArchaeabacteria*1 probability 0.563 Loss A in branch N9 probability 0.921 Loss A in branch Halobacteriumsp.NRC-1Archaeabacteria*1 probability 0.924 ===================== ancestral state probabilities NODE 0 1 2 N12 0.549 0.335 0.115 N13 0.0109 0.511 0.478 N14 0.000979 0.558 0.441 N15 8.84e-05 0.605 0.395 N16 0.00184 0.583 0.415 N17 0.0243 0.491 0.484 N18 0.27 0.221 0.508 N19 0.964 0.000418 0.0359 N20 0.988 4.92e-05 0.0119 N21 0.994 1.42e-05 0.0059 N22 0.997 9.74e-06 0.00332 N23 0.998 4.36e-06 0.00198 ShewanellaoneidensisEubacteria*0 1 0 0 N24 0.999 4.47e-07 0.000696 N25 1 1.59e-09 7.23e-05 N26 1 1.21e-11 6.41e-06 N27 1 3.1e-22 4.41e-11 N28 1 7.5e-31 1.79e-15 EscherichiacoliO157_H7EDL933Eubacteria*0 1 0 0 EscherichiacoliO157_H7Eubacteria*0 1 0 0 N29 1 7.28e-23 3.13e-11 N30 1 9.16e-27 1.98e-13 EscherichiacoliO6Eubacteria*0 1 0 0 EscherichiacoliEubacteria*0 1 0 0 N31 1 2.69e-29 1.07e-14 Shigellaflexneri2astr.2457TEubacteria*0 1 0 0 ShigellaflexneriEubacteria*0 1 0 0 N32 1 2.72e-16 3.33e-08 SalmonellatyphimuriumEubacteria*0 1 0 0 Salmonellaentericasubsp.entericaserovarTyphiTy2Eubacteria*0 1 0 0 N33 1 2.03e-09 7.53e-05 N34 1 4.49e-27 1.27e-13 YersiniapestisbiovarMedievalisstr.91001Eubacteria*0 1 0 0 N35 1 4.64e-36 4.47e-18 YersiniapestisKIMEubacteria*0 1 0 0 YersiniapestisEubacteria*0 1 0 0 Photorhabdusluminescenssubsp.laumondiiEubacteria*0 1 0 0 N36 0.996 3.2e-05 0.00361 N37 0.997 1.45e-05 0.00289 Buchneraaphidicola_Baizongiapistaciae_Eubacteria*0 1 0 0 N38 0.998 2.66e-06 0.00164 Buchneraaphidicola_Acyrthosiphonpisum_Eubacteria*0 1 0 0 Buchneraaphidicola_Schizaphisgraminum_Eubacteria*0 1 0 0 WigglesworthiaglossinidiaendosymbiontofGlossinabrevipalpisEubacteria*0 1 0 0 PseudomonasaeruginosaEubacteria*0 1 0 0 N39 0.999 2.7e-06 0.00146 N40 1 4.17e-10 3.11e-05 XylellafastidiosaTemecula1Eubacteria*0 1 0 0 XylellafastidiosaEubacteria*0 1 0 0 N41 1 1.85e-10 2.28e-05 Xanthomonasaxonopodispv.citriEubacteria*0 1 0 0 Xanthomonascampestrispv.campestrisEubacteria*0 1 0 0 CoxiellaburnetiiEubacteria*0 1 0 0 N42 0.994 2.6e-05 0.006 N43 0.997 6.85e-06 0.00292 N44 0.998 2.64e-06 0.00169 N45 1 1.52e-12 1.87e-06 NeisseriameningitidisserogroupAEubacteria*0 1 0 0 NeisseriameningitidisserogroupBEubacteria*0 1 0 0 ChromobacteriumviolaceumEubacteria*0 1 0 0 RalstoniasolanacearumEubacteria*0 1 0 0 NitrosomonaseuropaeaEubacteria*0 1 0 0 N46 0.357 0.21 0.433 N47 0.94 0.0019 0.0578 N48 0.997 3.54e-06 0.00306 N49 0.999 1.86e-07 0.000618 N50 1 1.46e-26 2.16e-13 AgrobacteriumtumefaciensCereonEubacteria*0 1 0 0 AgrobacteriumtumefaciensWashUEubacteria*0 1 0 0 SinorhizobiummelilotiEubacteria*0 1 0 0 N51 0.999 8.01e-07 0.00143 N52 1 1.11e-13 5.49e-07 BrucellamelitensisbiovarSuisEubacteria*0 1 0 0 BrucellamelitensisEubacteria*0 1 0 0 MesorhizobiumlotiEubacteria*0 1 0 0 N53 0.998 3.24e-06 0.0021 RhodopseudomonaspalustrisEubacteria*0 1 0 0 BradyrhizobiumjaponicumEubacteria*0 1 0 0 N54 4.1e-06 0.992 0.0076 RickettsiaprowazekiiEubacteria*1 0 1 0 RickettsiaconoriiEubacteria*1 0 1 0 N55 0.000202 0.957 0.0423 N56 3.51e-06 0.981 0.0187 N57 3.47e-06 0.982 0.0183 N58 1.7e-10 1 0.000178 HelicobacterpyloriJ99Eubacteria*1 0 1 0 HelicobacterpyloriEubacteria*1 0 1 0 HelicobacterhepaticusEubacteria*1 0 1 0 WolinellasuccinogenesEubacteria*1 0 1 0 CampylobacterjejuniEubacteria*1 0 1 0 N59 0.00236 0.716 0.281 Desulfovibriovulgarissubsp.vulgarisstr.HildenboroughEubacteria*1 0 1 0 N60 0.008 0.702 0.29 GeobactersulfurreducensEubacteria*1 0 1 0 BdellovibriobacteriovorusEubacteria*0 1 0 0 N61 0.00013 0.665 0.335 N62 0.00323 0.665 0.331 Fusobacteriumnucleatumsubsp.nucleatumEubacteria*0 1 0 0 N63 0.00132 0.833 0.165 AquifexaeolicusEubacteria*1 0 1 0 ThermotogamaritimaEubacteria*1 0 1 0 N64 0.000801 0.768 0.231 N65 0.00826 0.792 0.2 N66 0.0527 0.646 0.301 ThermusthermophilusHB27Eubacteria*1 0 1 0 DeinococcusradioduransEubacteria*0 1 0 0 Dehalococcoidesethenogenes195Eubacteria*2 0 0 1 N67 6.45e-05 0.959 0.041 N68 5.02e-06 0.978 0.0215 N69 8.36e-07 0.987 0.0133 N70 1.51e-06 0.986 0.0138 Nostocsp.PCC7120Eubacteria*1 0 1 0 Synechocystissp.PCC6803Eubacteria*1 0 1 0 SynechococcuselongatusEubacteria*1 0 1 0 N71 3.31e-06 0.984 0.0156 N72 2.81e-07 0.992 0.00797 N73 8.07e-08 0.996 0.00432 Synechococcussp.WH8102Eubacteria*1 0 1 0 Prochlorococcusmarinusstr.MIT9313Eubacteria*1 0 1 0 ProchlorococcusmarinusEubacteria*1 0 1 0 Prochlorococcusmarinussubsp.pastorisstr.CCMP1986Eubacteria*1 0 1 0 GloeobacterviolaceusEubacteria*1 0 1 0 N74 0.00319 0.603 0.394 N75 0.00144 0.718 0.281 N76 0.00593 0.738 0.256 N77 0.0618 0.6 0.338 N78 5.5e-15 1 3.77e-07 TropherymawhippleiTW08/27Eubacteria*1 0 1 0 Tropherymawhippleistr.TwistEubacteria*1 0 1 0 BifidobacteriumlongumEubacteria*0 1 0 0 N79 0.000829 0.712 0.287 N80 0.0014 0.298 0.7 N81 0.000331 0.0182 0.981 N82 2.58e-05 0.00106 0.999 N83 4.08e-12 7.39e-11 1 CorynebacteriumglutamicumATCC13032Eubacteria*2 0 0 1 CorynebacteriumglutamicumEubacteria*2 0 0 1 CorynebacteriumefficiensEubacteria*2 0 0 1 CorynebacteriumdiphtheriaeEubacteria*2 0 0 1 N84 2.85e-05 0.00237 0.998 N85 1.76e-05 0.000611 0.999 MycobacteriumlepraeEubacteria*2 0 0 1 N86 1.62e-14 2.84e-13 1 MycobacteriumtuberculosisCDC1551Eubacteria*2 0 0 1 MycobacteriumtuberculosisH37RvEubacteria*2 0 0 1 Mycobacteriumaviumsubsp.paratuberculosisEubacteria*2 0 0 1 N87 1.12e-07 0.996 0.00421 StreptomycesavermitilisEubacteria*1 0 1 0 StreptomycescoelicolorEubacteria*1 0 1 0 N88 0.000783 0.886 0.113 N89 1.78e-20 1 1.12e-09 LeptospirainterrogansserovarCopenhageniEubacteria*1 0 1 0 LeptospirainterrogansEubacteria*1 0 1 0 N90 0.000346 0.941 0.0586 N91 5.85e-05 0.962 0.0384 TreponemapallidumEubacteria*1 0 1 0 TreponemadenticolaEubacteria*1 0 1 0 BorreliaburgdorferiEubacteria*1 0 1 0 N92 0.964 0.0014 0.0347 PorphyromonasgingivalisEubacteria*0 1 0 0 BacteroidesthetaiotaomicronEubacteria*0 1 0 0 N93 0.0238 0.403 0.573 N94 0.00149 0.792 0.206 ThermoanaerobactertengcongensisEubacteria*1 0 1 0 N95 0.0001 0.797 0.203 N96 1.01e-05 0.906 0.0945 ClostridiumtetaniEubacteria*1 0 1 0 ClostridiumperfringensEubacteria*1 0 1 0 ClostridiumacetobutylicumEubacteria*2 0 0 1 N97 0.8 0.0112 0.189 N98 0.93 0.00576 0.0639 OnionyellowsphytoplasmaEubacteria*0 1 0 0 N99 0.983 0.00163 0.0152 N100 0.991 0.000445 0.00822 Mycoplasmamobile163KEubacteria*0 1 0 0 MycoplasmapulmonisEubacteria*0 1 0 0 N101 0.992 0.000353 0.00763 N102 0.993 0.000189 0.00644 N103 0.997 1.82e-05 0.00299 MycoplasmapneumoniaeEubacteria*0 1 0 0 MycoplasmagenitaliumEubacteria*0 1 0 0 MycoplasmagallisepticumEubacteria*0 1 0 0 MycoplasmapenetransEubacteria*0 1 0 0 N104 0.985 5.26e-05 0.0151 N105 0.994 6.82e-06 0.00598 N106 0.996 3.27e-06 0.0044 N107 1 2.51e-12 2.32e-06 N108 1 3.02e-17 1.14e-08 Listeriamonocytogenesstr.4bF2365Eubacteria*0 1 0 0 ListeriamonocytogenesEubacteria*0 1 0 0 ListeriainnocuaEubacteria*0 1 0 0 N109 0.991 1.29e-06 0.00893 N110 0.996 3.33e-06 0.004 OceanobacillusiheyensisEubacteria*0 1 0 0 BacillushaloduransEubacteria*0 1 0 0 N111 0.964 1.82e-05 0.0361 N112 0.00011 7.54e-06 1 N113 4.35e-08 1.97e-07 1 BacilluscereusATCC14579Eubacteria*2 0 0 1 BacilluscereusATCC10987Eubacteria*2 0 0 1 Bacillusanthracisstr.AmesEubacteria*2 0 0 1 BacillussubtilisEubacteria*0 1 0 0 N114 1 5.91e-08 0.000292 N115 1 2.03e-22 2.78e-11 Staphylococcusaureussubsp.aureusMW2Eubacteria*0 1 0 0 N116 1 4.36e-22 4.3e-11 Staphylococcusaureussubsp.aureusN315Eubacteria*0 1 0 0 Staphylococcusaureussubsp.aureusMu50Eubacteria*0 1 0 0 StaphylococcusepidermidisEubacteria*0 1 0 0 N117 0.998 2.18e-06 0.00195 N118 0.999 6.24e-07 0.00102 N119 0.999 6.34e-07 0.000917 N120 1 6.82e-09 0.000131 N121 1 7.16e-10 4.64e-05 N122 1 1.16e-10 1.97e-05 N123 1 3.21e-15 1.11e-07 StreptococcusagalactiaeserogroupIIIEubacteria*0 1 0 0 StreptococcusagalactiaeserogroupVEubacteria*0 1 0 0 N124 1 1.51e-15 7.53e-08 StreptococcuspyogenesEubacteria*0 1 0 0 N125 1 5.13e-19 1.48e-09 StreptococcuspyogenesMGAS8232Eubacteria*0 1 0 0 N126 1 2.27e-25 9.8e-13 StreptococcuspyogenesMGAS315Eubacteria*0 1 0 0 StreptococcuspyogenesSSI-1Eubacteria*0 1 0 0 StreptococcusmutansEubacteria*0 1 0 0 N127 1 1.16e-14 2.01e-07 StreptococcuspneumoniaeR6Eubacteria*0 1 0 0 StreptococcuspneumoniaeEubacteria*0 1 0 0 Lactococcuslactissubsp.lactisEubacteria*0 1 0 0 EnterococcusfaecalisEubacteria*0 1 0 0 N128 0.998 8.59e-06 0.00249 LactobacillusjohnsoniiEubacteria*0 1 0 0 LactobacillusplantarumEubacteria*0 1 0 0 N129 0.974 0.00238 0.0239 N130 0.991 4.76e-05 0.00879 N131 0.994 5.44e-05 0.00622 ThalassiosirapseudonanaCCMP1335PlantsEukarya*0 1 0 0 N132 0.994 0.000117 0.00584 CryptosporidiumhominisInvertebratesEukarya*0 1 0 0 Plasmodiumfalciparum3D7InvertebratesEukarya*0 1 0 0 N133 0.989 2.49e-05 0.0111 N134 0.994 8.06e-05 0.00618 N135 0.998 3.33e-06 0.0017 OryzasativaPlantsEukarya*0 1 0 0 ArabidopsisthalianaPlantsEukarya*0 1 0 0 CyanidioschyzonmerolaePlantsEukarya*0 1 0 0 N136 0.972 0.000204 0.0274 DictyosteliumdiscoideumInvertebratesEukarya*1 0 1 0 N137 0.989 5.28e-05 0.0111 N138 0.994 0.000109 0.006 N139 0.998 2.84e-06 0.00153 EremotheciumgossypiiPlantsEukarya*0 1 0 0 SaccharomycescerevisiaePlantsEukarya*0 1 0 0 SchizosaccharomycespombePlantsEukarya*0 1 0 0 N140 0.997 7.84e-06 0.00261 N141 0.999 1.64e-06 0.00147 N142 0.998 2.48e-06 0.00161 Anophelesgambiaestr.PESTInvertebratesEukarya*0 1 0 0 DrosophilamelanogasterInvertebratesEukarya*0 1 0 0 N143 1 2.82e-08 0.000234 N144 1 1.65e-08 0.000195 TakifugurubripesVertebratesEukarya*0 1 0 0 DaniorerioVertebratesEukarya*0 1 0 0 N145 1 1.31e-09 6.3e-05 N146 1 9.58e-12 6.02e-06 N147 1 2.03e-11 8.34e-06 RattusnorvegicusRodentsEukarya*0 1 0 0 MusmusculusRodentsEukarya*0 1 0 0 N148 1 1.09e-10 1.85e-05 HomosapiensPrimatesEukarya*0 1 0 0 PantroglodytesPrimatesEukarya*0 1 0 0 GallusgallusVertebratesEukarya*0 1 0 0 N149 1 1.51e-08 0.000144 CaenorhabditiselegansInvertebratesEukarya*0 1 0 0 CaenorhabditisbriggsaeInvertebratesEukarya*0 1 0 0 LeishmaniamajorInvertebratesEukarya*0 1 0 0 N11 0.307 0.437 0.257 N150 0.0406 0.76 0.2 NanoarchaeumequitansArchaeabacteria*1 0 1 0 N151 0.00467 0.894 0.101 N152 0.00141 0.928 0.0706 N153 8.18e-05 0.962 0.0382 SulfolobustokodaiiArchaeabacteria*1 0 1 0 SulfolobussolfataricusArchaeabacteria*1 0 1 0 AeropyrumpernixArchaeabacteria*1 0 1 0 PyrobaculumaerophilumArchaeabacteria*1 0 1 0 N4 0.532 0.115 0.353 N5 0.539 0.0891 0.372 N6 0.833 0.0149 0.152 N7 0.929 0.00715 0.0634 Methanothermobacterthermautotrophicusstr.DeltaHArchaeabacteria*0 1 0 0 MethanopyruskandleriArchaeabacteria*0 1 0 0 N8 0.984 0.000783 0.0154 MethanococcusmaripaludisArchaeabacteria*0 1 0 0 MethanocaldococcusjannaschiiArchaeabacteria*0 1 0 0 N9 2.82e-06 0.993 0.00749 N10 3.09e-09 0.999 0.00102 PyrococcushorikoshiiArchaeabacteria*1 0 1 0 PyrococcusabyssiArchaeabacteria*1 0 1 0 PyrococcusfuriosusArchaeabacteria*1 0 1 0 N3 0.694 0.0868 0.219 ArchaeoglobusfulgidusArchaeabacteria*0 1 0 0 N2 0.689 0.113 0.198 Halobacteriumsp.NRC-1Archaeabacteria*1 0 1 0 N1 0.998 3.07e-06 0.0019 MethanosarcinaacetivoransArchaeabacteria*0 1 0 0 MethanosarcinamazeiArchaeabacteria*0 1 0 0