Microbiology Tutorial


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How and Where to Infectious Agents Get Into Tissues?

The signs and symptoms may point to a particular site or organ system:

  • Ingested into the gastrointestinal tract, with abdominal pain, nausea, vomiting, diarrhea, melena - micro-organisms contaminating food or water (Shigella, Salmonella, Vibrio cholerae)

  • Inhaled into the respiratory tract, with cough, chest pain, dyspnea, hemoptysis - micro-organisms in the air that is breathed

  • Ascend into the urinary tract, with dysuria, hematuria, pelvic pain, flank pain - micro-organisms that get into the bladder via the urethra (or via a catheter) and can ascend as far as the kidneys

  • Ascend into the biliary tree, with vague abdominal pain, jaundice - micro-organisms that gain access to the common bile duct from the gastrointestinal tract and can ascend as far as the intrahepatic ducts of the liver

  • Cross mucosal surfaces, with local irritation, ulceration, pain, or late sequalae only - micro-organisms penetrate oral, anal, genital, or conjunctival mucosae (human papillomavirus, human immunodeficiency virus, herpes simplex virus, Neisseria gonorrheae)

  • Trauma - direct spread - micro-organisms are directly inoculated into wound sites

How do they spread within the body?

  • Travel via the bloodstream - septicemia

  • Travel via the lymphatics - enlarged, tender lymph nodes suggest possible infection at the site from which the lymphatics drain

  • Travel via a body cavity - can spread in the CSF, peritoneal fluid, joint space, etc.

  • Cross the placenta to the fetus - basis for congenital infection


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